I am aware that this issue has already been reported (#640), but I was wondering if it is appropriate to use the top coefficients from the adonis function when using the method "euclidean", as demonstrated below:
Can I refer to the PERMANOVA results from adonis (with method = "euclidean") and simultaneously reference the top coefficients, given that Euclidean distances were used in adonis?
I am aware that this issue has already been reported (#640), but I was wondering if it is appropriate to use the top coefficients from the adonis function when using the method "euclidean", as demonstrated below:
permanova4eucl <- adonis(t(taxaarticlef) ~ Variable1, data = metadataarticle, permutations=9999, method = "euclidean") coef <- coefficients(permanova4eucl)["Variable11",] coef <- coefficients(permanova4eucl)["Variable12",]
Can I refer to the PERMANOVA results from adonis (with method = "euclidean") and simultaneously reference the top coefficients, given that Euclidean distances were used in adonis?
Thank you very much for your clarification!