Hello!
I'm hoping to run RNA velocity on my Seurat object, but am having issues getting velocyto.R installed.
I've installed boost by:
$ sudo apt-get install libboost-dev
Reading package lists... Done
Building dependency tree
Reading state information... Done
libboost-dev is already the newest version (1.62.0.1).
0 upgraded, 0 newly installed, 0 to remove and 80 not upgraded.
and I'm still getting this error:
/usr/bin/ld: cannot find -lboost_filesystem
/usr/bin/ld: cannot find -lboost_system
collect2: error: ld returned 1 exit status
/usr/share/R/share/make/shlib.mk:6: recipe for target 'velocyto.R.so' failed
make: *** [velocyto.R.so] Error 1
ERROR: compilation failed for package ‘velocyto.R’
* removing ‘/home/usr/R/x86_64-pc-linux-gnu-library/3.6/velocyto.R’
installation of package ‘/tmp/Rtmpw9mnTP/file41811aacb91/velocyto.R_0.6.tar.gz’ had non-zero exit status
Any advice on this if the error persists after sudo apt-get install libboost-dev is run and the newest version is installed, but the error persists? Working on RStudio Server if it matters
Hello! I'm hoping to run RNA velocity on my Seurat object, but am having issues getting velocyto.R installed.
I've installed boost by:
and I'm still getting this error:
Any advice on this if the error persists after
sudo apt-get install libboost-devis run and the newest version is installed, but the error persists? Working on RStudio Server if it matters