search

venkatmi / altanalyze

Automatically exported from code.google.com/p/altanalyze
0 stars 2 forks source link

Bugs with constitutive vs. known exons (e.g. core probesets) #12

Open GoogleCodeExporter opened 8 years ago

GoogleCodeExporter commented 8 years ago 
What steps will reproduce the problem?
1. In version 2.02, run AltAnalyze for CEL or junction BED files and under 
Expression Analysis Parameters and "Determine gene expression levels using", 
select either "core probesets" or "known exons".

What is the expected output? What do you see instead?
-For exon and junction arrays, constitutive probesets will still be used for 
all calculations.

SOLUTION:
This bug is fixed in version 2.03. The bug was due to a conflicting variable 
name in the config file options.txt.

Original issue reported on code.google.com by nsalomo...@gmail.com on 27 May 2011 at 10:36