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ventolab / CellphoneDB

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
https://www.cellphonedb.org/
MIT License
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cellphonedb install problem #147

Closed wrfokokokwrf closed 7 months ago

wrfokokokwrf commented 8 months ago

hello， I have some questions. I installed cellphonedb on Ubuntu using the 'pip install cellphonedb' command. I can import the cellphonedb package on Python and see that it is version 4.0.0. 2 But I entered cellphonedb on the shell command line,but show "cellphonedb：command not found" how can I deal with this problem.I want to execute cellphonedb on the shell image

Thank you.

datasome commented 8 months ago

Hi wrfokokokwrf,

Apologies for not replying earlier - in CellphoneDB v4.0.0 we have moved to Jupyter notebook-based analyses - links to tutorials are available on https://cellphonedb.readthedocs.io/en/latest/RESULTS-DOCUMENTATION.html#novel-features-in-v4. Hope that helps.

Best,

Robert.