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ventolab / CellphoneDB

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
https://www.cellphonedb.org/
MIT License
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Cellphonedb for proteomics analysis #193

Open harshagr21 opened 3 weeks ago

harshagr21 commented 3 weeks ago

is:issue is:open can we use cellphonedb for proteomic data analysis. i have relative abudance of proteins among different samples (cells from different tissues.

ktroule commented 2 weeks ago

Hi.

I'm not familiar with the particularities your data but my thoughts are: Technically you can use, as long as the input format is as the expected and your values are non-negative. Bear in mind that your values are relative, which will likely alter the interpretation of the results.