ventolab / CellphoneDB

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
https://www.cellphonedb.org/
MIT License
304 stars 52 forks source link

Enhanced CellPhoneDB Visualization in Python #198

Open Starlitnightly opened 6 days ago

Starlitnightly commented 6 days ago

Dear CellPhoneDB Team,

I hope this message finds you well. My name is Zehua Zeng, and I am a part of the development team for OmicVerse, a community-driven platform focused on enhancing data visualization of single-cell genomics in Python.

We have recently integrated and improved the visualization capabilities of CellPhoneDB within OmicVerse. Our new features offer a more intuitive and aesthetically pleasing representation of the interaction data provided by CellPhoneDB。

Plotting Demo: https://starlitnightly.github.io/omicverse/Tutorials-single/t_cellphonedb/.

We were inspired by the visualization examples and recommendations on the CellPhoneDB website, and have incorporated advanced tools such as pycomplexheatmap and networkx, along with bespoke solutions tailored specifically for our platform.

Given these enhancements, we believe that OmicVerse can significantly enrich the user experience for CellPhoneDB users. We are eager to know if you have any additional suggestions or feedback that could further refine our implementation.

Best regards, Zehua

image image image image image image