search

ventolab / CellphoneDB

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
https://www.cellphonedb.org/
MIT License
308 stars 51 forks source link

Install CellphoneDB fails #88

Closed chrsyl closed 1 year ago

chrsyl commented 1 year ago

With pip install cellphonedb numpy<=1.19.5,>=1.16.5 is required. Installation fails at my MacBook M2 macosx-11.0-arm64-cpython-310 that uses numpy 1.21. I then installed python 3.9 and tried to install numpy 1.19.2. But then as with the initial cellphonedb install numpy install fails. How to proceed? When will cellphonedb be available for use under macosx-11.0-arm64?

prete commented 1 year ago

duplicate of #76 Workarounds for M1/M2 arm architectue involve using Rosetta. More info provided by @ktroule here: https://github.com/ventolab/CellphoneDB/issues/76#issuecomment-1477587320