Open rdalbanus opened 1 year ago
Hi.
The id-cp-interaction
is automatically created during the database build (conversion of input files to tables).
To map them directly you can create a pseudo key by joining partner_a | partner_b | protein_name_a | protein_name_b
columns.
Regards
Hi folks,
I've recently switched to CPDB v4 and noticed that the
id-cp-interaction
field is now empty inside theinteraction_input.csv
file. Is this a bug, or is there a reason for that?I can see this field inside the
interaction_table.csv
in the zip file, but the interactions are not in the same order asinteraction_input.csv
, and I couldn't find a way to map them directly.How can one obtain all the CPDB IDs from a given gene programmatically from the database in the current version?
Thanks!