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vgteam / long-read-giraffe-experiments

Experimental materials for testing the long-read mapping abilities of vg giraffe
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Figure out and fix HiFi reads that Giraffe leaves unmapped even on the R10 preset #38

Closed adamnovak closed 4 months ago

adamnovak commented 5 months ago

Benedict asked for this in https://ucsc-gi.slack.com/archives/CJ2EHEH1A/p1718913007525639?thread_ts=1718912578.359439&cid=CJ2EHEH1A

We might want to do this based on a more optimized preset and not just the R10 preset.