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vgteam / long-read-giraffe-experiments

Experimental materials for testing the long-read mapping abilities of vg giraffe
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Evaluate mapping to centromeres using CHM13 reads #41

Closed adamnovak closed 2 months ago

adamnovak commented 4 months ago

After https://github.com/vgteam/long-read-giraffe-experiments/issues/40 we need to actually evaluate mapping to centromeres that are present in the graph.

adamnovak commented 2 months ago

I ran this analysis and looked at centromeric vs. non-centromeric reads.