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vgteam / long-read-giraffe-experiments

Experimental materials for testing the long-read mapping abilities of vg giraffe
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Evaluate HiFi DV accuracy after training #53

Closed adamnovak closed 1 week ago

adamnovak commented 2 months ago

After Andrew trains DeepVariant on Giraffe HiFi reads, we need to use the resulting models and see if they fix Giraffe's calling accuracy on indels relative to Minimap2.