VG view gam - Githubissues

vgteam / vg

tools for working with genome variation graphs

https://biostars.org/tag/vg/

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Closed 8banzhuan closed 2 years ago

8banzhuan commented 2 years ago

I want to view the gam file information, but I get an error when I use the following command

./vg view -G sim.gam error[VPKG::load_one]: Correct input type not found in sim.gam while loading handlegraph::PathHandleGraph

lsoldini commented 2 years ago

-G indicate .gam output, so I think If you want .json : vg view -j -a sim.gam.