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vib-singlecell-nf / scenic

A repository for the scenic module of the vib-singlecell-nf pipeline

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Closed dweemx closed 4 years ago

dweemx commented 4 years ago

Upgrade Nextflow version to 20.04.1
Use params.global.project_name instead of foobar as "sample id"
Add sanity checks f70052e
Add profiles for cistarget hg19, mm19 dbs and annotations
Prevent running multi-runs SCENIC if numRuns > 2, maxForks > 1 and if not qsubbed