Closed cflerin closed 2 years ago
Is your feature request related to a problem? Please describe. The atac_preprocess workflow should handle both HyDrop designs: 3x96 and 2x384.
atac_preprocess
3x96
2x384
Describe the solution you'd like Change to using two hydrop technology types in the input metadata file: hydrop_2x384 and hydrop_3x96.
hydrop_2x384
hydrop_3x96
Describe alternatives you've considered It's also possible to make this a switch in the parameters/config file.
Additional context The current version of extract_hydrop_atac_barcode_from_R2_fastq.sh already supports this.
extract_hydrop_atac_barcode_from_R2_fastq.sh
Is your feature request related to a problem? Please describe. The
atac_preprocessworkflow should handle both HyDrop designs:3x96and2x384.Describe the solution you'd like Change to using two hydrop technology types in the input metadata file:
hydrop_2x384andhydrop_3x96.Describe alternatives you've considered It's also possible to make this a switch in the parameters/config file.
Additional context The current version of
extract_hydrop_atac_barcode_from_R2_fastq.shalready supports this.