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victorsanchezarevalo / pymportx

A Python package designed for fast gene count estimation using transcript quantification files generated by pseudoalignment or quasi-mapping tools.
MIT License
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Conda integration #1

Open SGMartin opened 2 weeks ago

SGMartin commented 2 weeks ago

Congratulations on the tool: looks promising. I was wondering If there are any plans to integrate pymportx with the conda package manager. Workflow managers such as snakemake rely on conda to deploy specific and reproducible versions of the tools used in a typical analysis pipeline. Thus, having pyimportx available somewhere in conda-forge or bioconda would be really useful.

victorsanchezarevalo commented 2 weeks ago

Thanks! We will try to upload the package to bioconda soon.