Closed astraetech closed 1 year ago
vincentarelbundock
commented
2 years ago I cannot replicate this error. The notebook compiles fine on my computer. Can you uninstall all the relevant packages, including modelsummary flextable rmarkdown, reinstall all the latest versions, and try again.
Do you get an error with a simple flextable example, without modelsummary? If so, the error should be reported on their repository.
astraetech
commented
2 years ago Here is my SessionInfo:
> sessionInfo()
R version 4.2.1 (2022-06-23 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19041)
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.utf8 LC_CTYPE=C
[3] LC_MONETARY=English_United States.utf8 LC_NUMERIC=C
[5] LC_TIME=English_United States.utf8
attached base packages:
[1] tools stats graphics grDevices utils datasets methods base
other attached packages:
[1] tidylog_1.0.2.9000 FFdownload_1.1.0 feather_0.3.5 furrr_0.3.1.9000
[5] rstatix_0.7.0 infer_1.0.3.9000 estimatr_1.0.0 colorDF_0.1.7
[9] ganttrify_0.0.0.9008 timevis_2.0.0.9000 frenchdata_0.2.0.9000 table.express_0.4.1
[13] correlationfunnel_0.2.0 TSstudio_0.1.6 trelliscopejs_0.2.10 flow_0.1.0
[17] boomer_0.1.1 explore_0.9.0 olsrr_0.6.0 reactable_0.3.0
[21] corrr_0.4.4.9000 startowd_0.1.0 vtable_1.3.4 echarts4r_0.4.4
[25] autostats_0.3.1 presenter_0.1.1 tidybins_0.1.0 framecleaner_0.2.0
[29] TidyConsultant_0.1.0 highcharter_0.9.4.9000 ggoutlier_0.1.0 dlookr_0.6.1.9001
[33] dataReporter_1.0.0 SmartEDA_0.3.8 GGally_2.1.2.9000 DataExplorer_0.8.2
[37] padr_0.6.1 rmsfuns_1.0.0.1 validate_1.1.1 naniar_0.6.1
[41] dtplyr_1.2.1 rpolygon.io_0.0.0.9000 doFuture_0.12.2-9000 future_1.29.0
[45] glueformula_0.1.0 threejs_0.3.4 igraph_1.3.5 fixest_0.11.0
[49] multidplyr_0.1.2.9000 binance_0.0.4 binancer_1.2.0 rameritrade_0.1.5
[53] crypto_1.1.3 rvest_1.0.3 censusapi_0.8.0.9000 rgdax_1.2.1
[57] httr_1.4.4 RCurl_1.98-1.8 jsonlite_1.8.3 digest_0.6.30
[61] hpiR_0.3.4 modelsummary_1.1.0.9000 Rfast_2.0.6 RcppZiggurat_0.1.6
[65] Rcpp_1.0.9 collapse_1.8.6 rcanvas_0.0.0.9001 reticulate_1.25-9000
[69] DataEditR_0.1.5 texreg_1.38.6 laviz_0.0.0.9000 qs_0.25.4
[73] fst_0.9.8 pointr_0.2.0 duckdb_0.4.0 RPostgreSQL_0.7-3
[77] DBI_1.1.3.9000 odbc_1.3.3.9000 pmdplyr_0.3.4 ExPanDaR_0.5.3
[81] fastDummies_1.6.3 DescTools_0.99.45 openxlsx_4.2.5 devEMF_4.1
[85] rvg_0.2.5 rsvg_2.3.1 xml2_1.3.3 validata_0.1.0
[89] ftExtra_0.4.0.9999 huxtable_5.5.0.9000 flextable_0.8.3 sjlabelled_1.2.0
[93] safejoin_0.1.0 diffdf_1.0.4 corrplot_0.92 flipTime_2.9.5
[97] slider_0.2.2.9000 tsibbledata_0.4.0 feasts_0.2.2 fabletools_0.3.2
[101] tsibble_1.1.1 plm_2.6-1 outliers_0.15 lfe_2.8-8
[105] stargazer_5.2.3 arsenal_3.6.3 janitor_2.1.0 qwraps2_0.5.2
[109] kableExtra_1.3.4 psych_2.2.5 xtable_1.8-4 basictabler_1.0.2
[113] descr_1.1.5 gt_0.7.0 gtsummary_1.6.2.9000 officer_0.4.4.001
[117] tidycensus_1.2.2 metricsgraphics_0.9.0 Hmisc_4.7-0 Formula_1.2-4
[121] survival_3.4-0 lattice_0.20-45 summarytools_1.0.0 skimr_2.1.4
[125] tidyquant_1.0.4 lubridate_1.9.0 timechange_0.1.1 tmap_3.3-3
[129] broom_1.0.1 mapview_2.11.0 rgdal_1.5-32 sp_1.5-0
[133] sf_1.0-8 RColorBrewer_1.1-3 mapdeck_0.3.40004 googleway_2.7.6001
[137] glue_1.6.2.9000 anomalize_0.2.2 transformr_0.1.3 gganimate_1.0.7
[141] RgoogleMaps_1.4.5.3 gifski_1.6.6-1 ggmap_3.0.0.903 microbenchmark_1.4.9
[145] reshape2_1.4.4 gtrendsR_1.5.1.9000 installr_0.23.2 rlang_1.0.6.9000
[149] haven_2.5.1 xlsx_0.6.5 pbapply_1.5-0 pander_0.6.5
[153] dygraphs_1.1.1.7 ff_4.0.7 bit_4.0.4 data.table_1.14.5
[157] anytime_0.3.9 readxl_1.4.1 forcats_0.5.2 dplyr_1.0.99.9000
[161] purrr_0.3.5 readr_2.1.3 tidyr_1.2.1 tibble_3.1.8
[165] tidyverse_1.3.2 stringr_1.4.1 stringi_1.7.8 mnormt_2.1.0
[169] ggplot2_3.4.0 plyr_1.8.7 gdata_2.18.0.1 compare_0.2-6
[173] PerformanceAnalytics_2.0.4 quantmod_0.4.20 TTR_0.24.3 xts_0.12.2
[177] timeSeries_4021.104 timeDate_4021.106 foreign_0.8-83 qpcR_1.4-1
[181] Matrix_1.5-1 robustbase_0.95-0 rgl_0.109.6 minpack.lm_1.2-2
[185] MASS_7.3-58.1 zoo_1.8-11 sas7bdat_0.6 iterators_1.0.14
[189] foreach_1.5.2 listviewer_3.0.0 ellipsis_0.3.2 curl_4.3.3
[193] checkpoint_1.0.2 devtools_2.4.4 usethis_2.1.6.9000 pacman_0.5.1
loaded via a namespace (and not attached):
[1] urlchecker_1.0.1 fracdiff_1.5-2 abind_1.4-5 katex_1.4.0
[5] modelr_0.1.8 memoise_2.0.1 emmeans_1.8.1-1 units_0.8-0
[9] munsell_0.5.0 performance_0.10.0.3 scales_1.2.1 listenv_0.8.0
[13] blob_1.2.3 bayestestR_0.13.0 pagedown_0.19 shinyjs_2.1.0
[17] leaflet_2.1.1 workflows_1.1.0 mclust_5.4.10 pryr_0.1.5
[21] jpeg_0.1-9 htmltools_0.5.3 pdp_0.8.1 clisymbols_1.2.0
[25] jquerylib_0.1.4 warp_0.2.0 xslt_1.4.3 XML_3.99-0.11
[29] urca_1.3-3 styler_1.7.0 parsnip_1.0.2 openssl_2.0.4
[33] tcltk_4.2.1 hrbrthemes_0.8.0 crayon_1.5.2 tidyselect_1.2.0
[37] rsample_1.1.0 withr_2.5.0 RcppParallel_5.1.5 fstcore_0.9.12
[41] future.apply_1.10.0 imputeTS_3.2 DEoptimR_1.0-11 shiny_1.7.2
[45] tzdb_0.3.0 googlesheets4_1.0.0 Rdpack_2.4 multcomp_1.4-20
[49] equatags_0.2.0 rappdirs_0.3.3 GPfit_1.0-8 gdtools_0.2.4
[53] sass_0.4.2 stars_0.5-6 yardstick_1.1.0 parallelly_1.32.1
[57] autocogs_0.1.4 RApiSerialize_0.1.2 deldir_1.0-6 interp_1.1-3
[61] fastmap_1.1.0 datawizard_0.6.3 uuid_1.1-0 fs_1.5.2.9000
[65] maxLik_1.5-2 stringfish_0.15.7 gargle_1.2.0 plotly_4.10.1
[69] ISLR_1.4 visdat_0.5.3 mvtnorm_1.1-3 cli_3.4.1
[73] profvis_0.3.7 DiceDesign_1.9 dbplyr_2.2.1 magick_2.7.3
[77] classInt_0.4-7 latticeExtra_0.6-30 lpSolve_5.6.15 gridtext_0.1.4
[81] pillar_1.8.1 prettyunits_1.1.1 R6_2.5.1.9000 Quandl_2.11.0
[85] remotes_2.4.2 bit64_4.0.5 lwgeom_0.2-8 dichromat_2.0-0.1
[89] stinepack_1.4 gtable_0.3.1 estimability_1.4.1 bslib_0.4.1
[93] xfun_0.34 lava_1.7.0 sampling_2.9 tweenr_1.0.2
[97] miniUI_0.1.1.1 gower_1.0.0 gtools_3.9.3 lifecycle_1.0.3
[101] splines_4.2.1 KernSmooth_2.23-20 credentials_1.3.2 highr_0.9
[105] showtextdb_3.0 globals_0.16.1 insight_0.18.6 backports_1.4.1-9000
[109] viridisLite_0.4.1 utf8_1.2.2 xlsxjars_0.6.1 rpart_4.1.19
[113] dials_1.0.0 generics_0.1.3 showtext_0.9-5 settings_0.2.7
[117] askpass_1.1 leafem_0.2.0 htmlTable_2.4.1 tigris_1.6.1
[121] sessioninfo_1.2.2 tmaptools_3.1-1 tune_1.0.0 recipes_1.0.3
[125] fidelius_0.0.2 logger_0.2.2 hms_1.1.2 forecast_8.18
[129] png_0.1-7 coda_0.19-4 rlist_0.4.6.2 rmarkdown_2.18
[133] assertthat_0.2.1 lazyeval_0.2.2 inum_1.0-4 patchwork_1.1.2
[137] V8_4.2.2 numDeriv_2016.8-1.1 sandwich_3.0-2 prodlim_2019.11.13
[141] htmlwidgets_1.5.4.9000 hardhat_1.2.0 grid_4.2.1 R.oo_1.25.0
[145] callr_3.7.3 parameters_0.19.0.10 rbibutils_2.2.8 zip_2.2.2
[149] R.methodsS3_1.8.2 rio_0.5.29 DistributionUtils_0.6-0 fansi_1.0.3
[153] matrixStats_0.62.0 cluster_2.1.4 ggtext_0.1.1 partykit_1.2-16
[157] expm_0.999-6 systemfonts_1.0.4 knitr_1.40 bdsmatrix_1.3-6
[161] ranger_0.14.1 repr_1.1.4 satellite_1.0.4 lmom_2.9
[165] ps_1.7.2 raster_3.5-21 formatR_1.12 bitops_1.0-7
[169] quadprog_1.5-8 timetk_2.8.1.9000 leafsync_0.1.0 networkD3_0.4
[173] sysfonts_0.8.8 proxy_0.4-27 pkgload_1.3.0 TH.data_1.1-1
[177] rapportools_1.1 clipr_0.8.0 gitcreds_0.1.2 rstudioapi_0.14
[181] parallel_4.2.1 magrittr_2.0.3.9000 nortest_1.0-4 shinycssloaders_1.0.0
[185] svglite_2.1.0 snakecase_0.11.0 ggpubr_0.4.0 libcoin_1.0-9
[189] rhandsontable_0.3.9 Rttf2pt1_1.3.10 gridExtra_2.3 Exact_3.1
[193] gld_2.6.5 stats4_4.2.1 lhs_1.1.5 terra_1.6-3
[197] vctrs_0.5.0.9000 cachem_1.0.6 crosstalk_1.2.0 R.cache_0.16.0
[201] colorspace_2.0-3 httpuv_1.6.6 carData_3.0-5 tseries_0.10-52
[205] rootSolve_1.8.2.3 tbl2xts_1.0.4 base64enc_0.1-3 class_7.3-20
[209] nnet_7.3-18 reprex_2.0.1 tables_0.9.10 later_1.3.0
[213] reshape_0.8.9 extrafontdb_1.0 DT_0.25 nlme_3.1-160
[217] car_3.1-0 pkgbuild_1.3.1 ipred_0.9-13 checkmate_2.1.0
[221] compiler_4.2.1 dreamerr_1.2.3 rJava_1.0-6 farver_2.1.1
[225] extrafont_0.18 distributional_0.3.0 googledrive_2.0.0 codetools_0.2-18
[229] evaluate_0.18 yaml_2.3.6 goftest_1.2-3 cellranger_1.1.0
[233] promises_1.2.0.1 broom.helpers_1.9.0 tictoc_1.0.1 ggsignif_0.6.3
[237] maptools_1.1-4 lmtest_0.9-40 webshot_0.5.4 shinyBS_0.61.1
[241] boot_1.3-28 R.utils_2.12.0 pak_0.3.0 progress_1.2.2
[245] processx_3.8.0 effectsize_0.8.2 e1071_1.7-11 mime_0.12
[249] miscTools_0.6-26 pkgconfig_2.0.3 Good to know it works on your end. I will perform testing on my end then.
astraetech
commented
2 years ago I uninstalled and reinstalled flextable. Just running flextable yields the same error. Posted on flextable issue tracker. https://github.com/davidgohel/flextable/issues/484
vincentarelbundock
commented
1 year ago so this is fixed upstream, right?
Hi Vincent,
Really not sure what's going on here as things were working great back in Spring. Knitting to Word worked without a hitch.
Here is a reprex. I get an error when knitting this to Word. HTML works fine.
Error:
It seems those params are set in flextable in one place but it seems not used when modelsummary calls flextable? Applies to both "fixed" and "autofit".
If you could take a look at this it would be awesome. Thank you for developing this package as always :)