[Strategy Market] [Switch] Elements: Down boost hairpin loops in switching area

[vineetsk1]

Original Author: Eli Fisker Original Link: https://getsatisfaction.com/eternagame/topics/-strategy-market-switch-elements-down-boost-hairpin-loops-in-switching-area

Strategy

Penalize end loops that has low energy in loops in hairpins that participate in the switching area.

For hairpin loops in the switching area, at 5 base pair and longer, reward if the end loop has high positive energy and penalize increasingly the more negative the energy becomes.

For hairpin loops in the switching area, at 4 base pairs and shorter, reward up boosting.

Background

https://getsatisfaction.com/eternagam...

https://docs.google.com/document/d/1f...

[vineetsk1]

Implemented with 26 lines of code.