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virajbdeshpande / AmpliconArchitect

AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and elucidates the architecture of the amplicon. In the current version, AA takes as input next generation sequencing reads (paired-end Illumina reads) mapped to the hg19/GRCh37 reference sequence and one or more regions of interest. Please "watch" this repository for improvements in runtime, accuracy and annotations for GRCh38 human reference genome coming up soon.
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Release tags missing #136

Open jbedo opened 1 year ago

jbedo commented 1 year ago

Please add tags corresponding to release commits, it's useful for packaging.

jluebeck commented 1 year ago

Just fyi - releases are tagged on the jluebeck fork which has versions from 1.3_r1 and on tagged. These versions are currently pending a merge into Viraj's repo.