AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and elucidates the architecture of the amplicon. In the current version, AA takes as input next generation sequencing reads (paired-end Illumina reads) mapped to the hg19/GRCh37 reference sequence and one or more regions of interest. Please "watch" this repository for improvements in runtime, accuracy and annotations for GRCh38 human reference genome coming up soon.
Hi @cmdcolin, thanks for checking in these typo fixes and the url link. We do our active development on this tool over at https://github.com/AmpliconSuite/AmpliconArchitect. Would you mind opening the PRs there?
Fairly pedantic but i ran typos-cli over the codebase :) https://crates.io/crates/typos-cli
all these were auto-fixed by the program