search

viralemergence / virion

An open database of vertebrate-virus interactions
37 stars 9 forks source link

Host synonyms as accessible metadata #53

Open cjcarlson opened 3 years ago

cjcarlson commented 3 years ago

This would be a great thing to implement, but @rorygibb and I may want to go back to the drawing board on what findSyns does and update the function a bit. It should also probably be implemented once in the final VIRION file - and maybe, even then, just as an extra column in the HostTaxonomy dissolved file.

cjcarlson commented 3 years ago

(When this is implemented or otherwise addressed, HostSynonyms field should be removed from the universal format in the upstream parts of the pipeline)