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Experiment Repository Creation Request for Neuron Simulation Virtual Lab AU #725

Open amritamindbrain opened 3 years ago

amritamindbrain commented 3 years ago

Repository Creation Request Phase-2

Use this to get your experiment repository created or updated on GitHub under Virtual Labs organization.

  1. Coordinating Institute: Amrita Vishwa Vidyapeetham

  2. Approver’s Name: Dr. Shyam Diwakar

  3. Primary GitHub Handle Details:

    Name: Amrita Mind Brain Center
    GitHub Handle: @amritamindbrain
    Email id: mindbrain@amrita.edu

  4. Secondary GitHub Handle Details:

    Name: Joshy Alphonse
    GitHub Handle: @joshy-alphonse
    Email id: joshya@am.amrita.edu
amritamindbrain commented 3 years ago

Following are the 10 experiments in Neuron Simulation Virtual Lab :

  1. Modeling resting potentials in Neurous
  2. Modeling action potentials
  3. Modeling the delayed rectifier Potassium channels
  4. Modeling the sodium ion channel and its effects on neural signaling
  5. Current Clamp protocol
  6. Voltage Clamp Protocol
  7. Understanding first spike latency-current relationship
  8. Understanding Frequency-Current relationship.
  9. Voltage-Current (VI) plot
  10. Effects of pharmacological blockers on action
pavanchow commented 3 years ago

@amritamindbrain Please find the links for Neuron Simulation Virtual Lab experiments and populate the repositories with sources of the experiments as detailed in Step 4 of the migration document.

  1. Modeling resting potentials in Neurous - https://github.com/virtual-labs/exp-modeling-resting-potentials-au
  2. Modeling action potentials - https://github.com/virtual-labs/exp-modeling-action-potentials-au
  3. Modeling the delayed rectifier Potassium channels - https://github.com/virtual-labs/exp-potassium-channels-au
  4. Modeling the sodium ion channel and its effects on neural signaling - https://github.com/virtual-labs/exp-sodium-ion-channel-au
  5. Current Clamp protocol - https://github.com/virtual-labs/exp-current-clamp-protocol-au
  6. Voltage Clamp Protocol - https://github.com/virtual-labs/exp-voltage-clamp-protocol-au
  7. Understanding first spike latency-current relationship - https://github.com/virtual-labs/exp-spike-latency-current-relationship-au
  8. Understanding Frequency-Current relationship - https://github.com/virtual-labs/exp-frequency-current-relationship-au
  9. Voltage-Current (VI) plot - https://github.com/virtual-labs/exp-voltage-current-plot-au
  10. Effects of pharmacological blockers on action - https://github.com/virtual-labs/exp-pharmacological-blockers-au
joshy-alphonse commented 3 years ago

@pavanchow I don't have write access to theses repos. Not able to commit or make pull requests.

pavanchow commented 3 years ago

@joshy-alphonse You have access to all the experiment repositories mentioned above. You might be seeing an error while pushing because of the new changes in GitHub. GitHub no longer supports passwords with terminal(Command Line). Please follow this document and create a Personal Access Token(PAT) then while pushing the changes give PET instead of password. Document : https://docs.github.com/en/github/authenticating-to-github/keeping-your-account-and-data-secure/creating-a-personal-access-token