virtualcell / vcell

Virtual Cell Framework
http://vcell.org/
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BUG: VCell Alpha v.105 local sims fail on Mac #1170

Closed lesloew closed 6 months ago

lesloew commented 7 months ago

Here's the initial error message when trying to run the non-spatial stochastic sim locally on Mac (M1-Max chip; OS 14.3.1; Rel local sims work fine); I used the BioModel "Rule-Based_Ran_Transport" tutorial, but I don't think it matters. This is not a problem with Alpha 105 on Windows, or with REL on mt Mac.

Error, 1 of 1 sim results failed to display: 'Stochastic' - /Applications/VCell_Alpha.app/Contents/java/app/nativelibs/mac64/libjhdf5.jnilib: dlopen(/Applications/VCell_Alpha.app/Contents/java/app/nativelibs/mac64/libjhdf5.jnilib, 0x0001): tried: '/Applications/VCell_Alpha.app/Contents/java/app/nativelibs/mac64/libjhdf5.jnilib' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64')), '/System/Volumes/Preboot/Cryptexes/OS/Applications/VCell_Alpha.app/Contents/java/app/nativelibs/mac64/libjhdf5.jnilib' (no such file), '/Applications/VCell_Alpha.app/Contents/java/app/nativelibs/mac64/libjhdf5.jnilib' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64'))

Subsequently trying to run local sims produces a shorter error message: Error, 1 of 1 sim results failed to display: 'Stochastic' - Could not initialize class cbit.vcell.simdata.DataSetControllerImpl