Update to force some sequences to be added

virus-evolution / phylopipe

Pipeline to build a massive tree from global data

GNU General Public License v3.0

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Update to force some sequences to be added #2

Closed rmcolq closed 3 years ago

rmcolq commented 3 years ago

Currently have a mode where if a lineage designations file is input, usher is expected to add these sequences somewhere even if there is more than one maximum-parsimony place for it. Want to force new sequences for a day to be added (currently not guaranteed)

rmcolq commented 3 years ago

Fixed in commits 794a55bbbcbb076652489cf48f81fd3eec6da7b6, stable version 3a0b87e33b2d938c12c788cfcc827e00a09c56a9