virusseq / portal-ui

Canadian VirusSeq Data Portal
https://virusseq-dataportal.ca/
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Update Sample Information - ON #307

Closed GH-Emily closed 2 years ago

GH-Emily commented 2 years ago

Hi @sifavahora,

Could you please update the attached samples for their reason for sequencing and reason for sequencing details?

NML_PHO_reasons_for_sequencing_illumina_2022-07-26_DPupdate1.csv NML_PHO_reasons_for_sequencing_illumina_2022-07-26_DPupdate2.csv

I will be submitting more very similar updates, so if you want to hold off on this update until I have time to drop those, feel free :) Let me know if you want the additional updates posted in this issue or added as an additional one!

ghost commented 2 years ago

Hi @GH-Emily,

Please add the additional updates on the this ticket itself. We will do all of them together. Thanks.

GH-Emily commented 2 years ago

@sifavahora,

okay, after further review, it looks like the remainder of samples that I'm dealing with haven't been submitted to data portal yet! So the only samples to update are in the two attached files above :)

Emily

edsu7 commented 2 years ago

1248 samples have been updated. The following is an example:

"submitterSampleId": "ON_476355",
"experiment": {
    "purpose_of_sequencing": "Missing",
    "purpose_of_sequencing_details": "Missing"
  },

updated to

"submitterSampleId": "ON_476355",
  "experiment": {
    "purpose_of_sequencing": "Baseline surveillance (random sampling)",
    "purpose_of_sequencing_details": "Surveillance of international border crossing by air travel or ground transport"
  },
ghost commented 2 years ago

@GH-Emily can you please close this if applicable? Thanks.