virusseq / portal-ui

Canadian VirusSeq Data Portal
https://virusseq-dataportal.ca/
GNU Affero General Public License v3.0
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metadata update- QC #324

Closed ChanchalYa closed 2 years ago

ChanchalYa commented 2 years ago

Hi there @sifavahora,

Could you please update the Gisaid Accession for the sample- QC_300592 to EPI_ISL_2293776 ?

Thanks, Chanchal

edsu7 commented 2 years ago

@ChanchalYa QC_300592's gisaid_accession is already EPI_ISL_2293776.

"studyId": "LSPQ-QC",
"samples": [
    {
      "submitterSampleId": "QC_300592",
      }
],
  "database_identifiers": {
    "gisaid_accession": "EPI_ISL_2293776"
  }
ChanchalYa commented 2 years ago

Hi @edsu7 ,

I see the GISAID accession for this sample as EPI_ISL_7713672 on VirusSeq.

image

edsu7 commented 2 years ago

Portal should be displaying correct gisaid_accession.

For this particular sample the portal and our database desynced.

We had help troubleshooting and settled on suppressing the old version and resubmitting the new one.

image

ChanchalYa commented 2 years ago

Thanks very much, @edsu7 !