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virusseq / singularity

Singularity - All Contributors, All Files
GNU Affero General Public License v3.0
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TSV creation fails due to array fields #43

Closed justincorrigible closed 2 years ago

justincorrigible commented 2 years ago

As found on the logs, Singularity expects a string from Elasticsearch for a few fields that have been updated into arrays. These fields in the tsv are all hardcoded, and there should be a way to specify not just the fields but their type (similar to how we do in Arranger) image.png

ghost commented 2 years ago

This fails the release bundle building in turn