search

vitalit-sib / msviz-backend

A mass spectrometry visualization platform, developed by the PAF & Vital-IT, Swiss Institute of Bioinformatics.
Other
8 stars 5 forks source link

add a sequence source collection #13

Closed alexmasselot closed 9 years ago

alexmasselot commented 9 years ago

This would be another colleciton (thus another service) with:

to be in sync with <SearchDatabase location="file:////local/mascot_server_2-4_data/sequence/SwissProt_ID/current/SwissProt_2014_08.fasta" id="SDB_SwissProt_ID" name="SwissProt_ID" numDatabaseSeq uences="546238" numResidues="194363168" version="SwissProt_2014_08.fasta">

    <DatabaseName>
      <userParam name="SwissProt_2014_08.fasta" />
    </DatabaseName>
    <cvParam accession="MS:1001073" name="database type amino acid" cvRef="PSI-MS" />
  </SearchDatabase>
alexmasselot commented 9 years ago

http://localhost:9000/sequence/stats