issues
search
vivarium-collective
/
vivarium-core
Core Interface and Engine for Vivarium
https://vivarium-core.readthedocs.io/
Apache License 2.0
25
stars
2
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
make global_time_precision an Engine parameter
#190
eagmon
closed
2 years ago
0
track composite updates in engine
#189
eagmon
closed
2 years ago
0
RAMEmitter only returns query if data exists
#188
eagmon
closed
2 years ago
0
changes to get notebook running all the way through
#187
eagmon
closed
2 years ago
0
Apply function to data from emitter
#186
thalassemia
closed
2 years ago
0
timestep instead of time_step
#185
eagmon
closed
2 years ago
0
Prototype of logging updates
#184
U8NWXD
closed
1 year ago
1
floating-point timestep precision
#183
eagmon
closed
2 years ago
0
add pytest to setup
#182
eagmon
closed
2 years ago
0
vivarium-core requires pytest
#181
eagmon
closed
2 years ago
1
Handle nan in units serializer
#180
U8NWXD
closed
2 years ago
0
Register the Injector process
#179
U8NWXD
closed
2 years ago
0
remove compose_experiment from composition.py
#178
eagmon
closed
2 years ago
0
Process keywords
#177
eagmon
closed
2 years ago
0
Fix units serializer to correctly handle lists and tuples
#176
U8NWXD
closed
2 years ago
0
override schema directly in Engine
#175
eagmon
closed
2 years ago
3
make PyPI name more prominent in readme
#174
eagmon
closed
2 years ago
0
Pull Schema, Topology, and Hierarchy Utilities into Separate Library
#173
U8NWXD
opened
2 years ago
0
project assembly_id when querying db
#172
eagmon
closed
2 years ago
0
Improve Handling of Process Parameters and Defaults
#171
U8NWXD
opened
2 years ago
2
Set emits on/off in Store
#170
eagmon
closed
2 years ago
0
`get_history_data_db` remove time key requirement
#169
eagmon
closed
2 years ago
0
More flexible topology rewiring for glob schemas
#168
U8NWXD
opened
2 years ago
5
Make Serializers Robust and Structured
#167
U8NWXD
closed
2 years ago
0
Stop adding units to emitted data keys
#166
U8NWXD
opened
2 years ago
0
Store initial_state
#165
eagmon
closed
2 years ago
0
Add _no_original_parameters config to Process
#164
U8NWXD
closed
2 years ago
0
Fix divider and flow bugs
#163
U8NWXD
closed
2 years ago
0
add vivarium reference to docs
#162
eagmon
closed
2 years ago
0
initial_state added to Composite
#161
eagmon
closed
2 years ago
2
Support serialization with original parameters from subclasses
#160
U8NWXD
closed
2 years ago
1
Process Serialization with Inheritance
#159
U8NWXD
closed
2 years ago
3
Composite API
#158
eagmon
closed
2 years ago
0
Composite.generate_store flows and steps
#157
eagmon
closed
2 years ago
2
minor fixes
#156
eagmon
closed
2 years ago
0
Add error messages for flows with extra steps and unknown dividers
#155
U8NWXD
closed
2 years ago
0
Interrupts for Engine
#154
eagmon
opened
2 years ago
2
resize tutorial figures
#153
eagmon
closed
2 years ago
0
Post-v1.0.0 Documentation Updates
#152
U8NWXD
opened
2 years ago
0
make Engine.run_steps public again
#151
eagmon
closed
2 years ago
0
Update docs
#150
U8NWXD
closed
2 years ago
0
Add Mattheus, Sean, Michael, and William to AUTHORS.md
#149
U8NWXD
closed
2 years ago
1
Bump version to 1.0.0
#148
U8NWXD
closed
2 years ago
0
Pass Parameters Positionally in __setstate__
#147
U8NWXD
closed
2 years ago
0
Update Documentation
#146
U8NWXD
closed
2 years ago
1
Name workflows and create codeowners for permissions
#145
U8NWXD
closed
2 years ago
3
Readme
#144
eagmon
closed
2 years ago
0
make methods private
#143
eagmon
closed
2 years ago
0
Permissions and Responsibilities Structure
#142
U8NWXD
closed
2 years ago
1
Add community health files
#141
U8NWXD
closed
2 years ago
1
Previous
Next