added testing and pyrdfstore

[cedricdcc]

This PR adds the following:

• Adds Makefile with single testing and graphdb testing capabilities
• yml .github workflow fro PR testing
• submodule folder layout
• the original code and testing from py-rdf-store with some small refactoring on where the variables come from

Issues tackled in this PR:

• 37

• 43

• 38

• 40

• 41

• 48

• 10

[marc-portier]

also slightly worrying that the automated tests seem to be failing best to make sure that gets resolved too (strangely my own experience is that tests seem to run nicely locally)

also: the requested split / reposition of the **clean stuff should be accompanied by a reposition of the matching tests I guess

[marc-portier]

@cedricdcc found some time today to give a hint about that reorganiszation of the cleaning code see https://github.com/vliz-be-opsci/py-sema/tree/fix/commons-clean

possibly useful to merge into this branch / PR

[marc-portier]

automated tests still failing -- any clue about the why?

[cedricdcc]

automated tests still failing -- any clue about the why?

It has something todo with the coverage tests from @JotaFan.

Installing collected packages: coverage, coverage-badge Successfully installed coverage-7.5.4 coverage-badge-1.1.1 Traceback (most recent call last): File "/opt/hostedtoolcache/Python/3.12.4/x64/bin/coverage-badge", line 5, in from coverage_badge.main import main File "/opt/hostedtoolcache/Python/3.12.4/x64/lib/python3.12/site-packages/coverage_badge/main.py", line 7, in import pkg_resources

All our tests that are provided succeed.

[github-actions[bot]]

Tests coverage table for a147366 commit.

	Name	Stmts	Miss	Cover	Missing
sema/commons/clean/clean.py	104	0	100.0%
sema/commons/j2/j2_functions.py	102	6	94.12%	59 138 140 172 195 204
sema/commons/j2/rdf_syntax_builder.py	6	0	100.0%
sema/commons/j2/syntax_builder.py	33	3	90.91%	31 39 41
sema/commons/log/loader.py	16	1	93.75%	28
sema/commons/store/build.py	9	1	88.89%	24
sema/commons/store/store.py	181	55	69.61%	150-151 330-333 335-336 338 341-342 349-350 354 357-359 363-365 368-369 372-373 376-377 380-381 398 401 403 410 414-415 417 422-423 426 428 431 436 441 444 447-448 451 455 518 521 524 529 532 535 538 542
TOTAL	451	66	85.37%