vlothec / TRASH

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cluster #7

Closed duhuipeng closed 1 year ago

duhuipeng commented 1 year ago

Dear author

The article said the proportion of AthCEN178 between the two strains of each chromosome was calculated and divided into 9 groups by cluster clustering.

How does this cluster work(as follow)? Could you tell me how to do it and how did get the nine groups?What is it that determines the 9 cluster? image

Best

vlothec commented 1 year ago

Clustering was done using the hclust function from stats package in R, then it was plotted (fig 1D) and groups were extracted based on them