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vmaffei
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dada2_to_picrust
Experimental pipeline to perform de novo PICRUSt on de-noised amplicon sequence variants (ASV)
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The publication for this experimental pipeline
#20
MarwaElnaiem
closed
4 years ago
2
vsearch-error
#19
liucong2016
opened
4 years ago
1
Problem with vsearch
#18
marlenec
closed
5 years ago
5
TypeError: sample_counts.biom does not appear to be a BIOM file!
#17
palomo11
closed
6 years ago
3
Vmaffei patch 1
#16
vmaffei
closed
6 years ago
0
Batched trait prediction is incomplete
#15
fanli-gcb
closed
6 years ago
6
Input to part 3 (format_tree_and_trait_table.py)
#14
fanli-gcb
closed
6 years ago
9
vsearch error
#13
kholt1992
opened
6 years ago
25
ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()
#12
jjmmii
closed
6 years ago
3
error on line "biom_object <- biomformat::make_biom(data = seqtab_biom)"
#11
jjmmii
closed
6 years ago
3
format_tree_and_trait_table.py memory issue
#10
nebfield
closed
6 years ago
8
V2.3
#9
vmaffei
closed
6 years ago
0
predict_metagenomes.py error
#8
eberdan
opened
6 years ago
9
predict_traits.py memory issue?
#7
giriarteS
opened
6 years ago
11
elemental Q regarding input seq format 'seqtab.nochim.robj'
#6
junhuili
closed
6 years ago
2
V2.1
#5
vmaffei
closed
7 years ago
0
format_tree_and_trait_table.py RuntimeError: Delimiter ' ' not in line
#4
josemseoane
opened
7 years ago
4
utf8 codec Issue in both Ubuntu & Fedora
#3
josemseoane
closed
7 years ago
2
V2
#2
vmaffei
closed
7 years ago
0
comparison to published picrust pipeline
#1
colinbrislawn
opened
7 years ago
14