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vmikk / metagMisc

Miscellaneous functions for metagenomic analysis.
MIT License
44 stars 11 forks source link

Prevalence function missing from install #26

Closed LukDrey closed 11 months ago

LukDrey commented 11 months ago

Hi vmikk,

loving the package!

I just wanted to make you aware that using devtools::install_github("vmikk/metagMisc") somehow does not install the prevalence() function. I am not sure if I am doing something wrong or if it is a problem.

Best

Lukas

vmikk commented 11 months ago

Hello Lucas @LukDrey !

Thank you for reporting this issue! It appears that I overlooked exporting this function to the package's namespace. In the meantime, you can use this function by invoking it through metagMisc:::prevalence(physeq).

With kind regards, Vladimir

LukDrey commented 11 months ago

Hi Vladimir,

thanks for the quick response! I didn't know about the ::: method. Thanks for that! I defined the function myself from your source code, but obviously the ::: are more elegant.

Best

Lukas

vmikk commented 11 months ago

Closed via 4d875dd5102e7adeba50a316f2073b382b42648b