T019 · Molecular dynamics simulation - problems installing dependencies in Colab

volkamerlab / teachopencadd

TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data

https://projects.volkamerlab.org/teachopencadd

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T019 · Molecular dynamics simulation - problems installing dependencies in Colab #403

Open dimkorov opened 8 months ago

dimkorov commented 8 months ago

Hello,

I am trying to use the talktorial.ipynd but for some reason it gets stuck at the 2o kernel (at the step: > !conda install -q -y -c conda-forge mdtraj openmm openmmforcefields pdbfixer pypdb rdkit) The message "Solving environment: ...working..." was there for 10mins or so.

Is this a bug and can I overcome it?

Thanks

Best, Dimitris