voutcn / megahit

Ultra-fast and memory-efficient (meta-)genome assembler
http://www.ncbi.nlm.nih.gov/pubmed/25609793
GNU General Public License v3.0
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Question about output name #292

Open Ahmed-Shibl opened 3 years ago

Ahmed-Shibl commented 3 years ago

Hi, this is a very minor question; I plan to run megahit on a handful of samples one after the other and I would like to have them all in the same output directory. My question is, will they all be named final.contigs.fa? is there a way that I can define the name of the fasta file for each of the samples?

Thanks!