Closed niexiaoqing closed 3 years ago
2021-06-04 10:34:14 - b'INFO main_assemble.cpp : 129 - Loading succinct de Bruijn graph: /yanjiuyuan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/tmp/k27/27Don e. Time elapsed: 104.404041' 2021-06-04 10:34:14 - b'INFO main_assemble.cpp : 133 - Number of Edges: 6525813336; K value: 27' 2021-06-04 10:34:14 - b'INFO main_assemble.cpp : 140 - Number of CPU threads: 30' 2021-06-04 10:34:17 - Error occurs, please refer to /yanjiuyuan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/log for detail 2021-06-04 10:34:18 - Command: /sdf/lindechun/Software/anaconda3/bin/megahit_core assemble -s /yanjiuyuan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/tmp/k27/27 -o /yanjiuy uan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/intermediate_contigs/k27 -t 30 --min_standalone 380 --prune_level 2 --merge_len 20 --merge_similar 0.95 --cleaning_rounds 5 --disconnect_ratio 0.1 --low_local_ratio 0.2 --cleaning_rounds 5 --min_depth 2 --bubble_level 2 --max_tip_len -1 --careful_bubble; Exit code -11
2021-06-04 10:34:14 - b'INFO main_assemble.cpp : 129 - Loading succinct de Bruijn graph: /yanjiuyuan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/tmp/k27/27Don e. Time elapsed: 104.404041' 2021-06-04 10:34:14 - b'INFO main_assemble.cpp : 133 - Number of Edges: 6525813336; K value: 27' 2021-06-04 10:34:14 - b'INFO main_assemble.cpp : 140 - Number of CPU threads: 30' 2021-06-04 10:34:17 - Error occurs, please refer to /yanjiuyuan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/log for detail 2021-06-04 10:34:18 - Command: /sdf/lindechun/Software/anaconda3/bin/megahit_core assemble -s /yanjiuyuan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/tmp/k27/27 -o /yanjiuy uan/Project/niexiaoqing/xqnie/contig_assemble/megahit_ass/megahit/intermediate_contigs/k27 -t 30 --min_standalone 380 --prune_level 2 --merge_len 20 --merge_similar 0.95 --cleaning_rounds 5 --disconnect_ratio 0.1 --low_local_ratio 0.2 --cleaning_rounds 5 --min_depth 2 --bubble_level 2 --max_tip_len -1 --careful_bubble; Exit code -11