voutcn / megahit

Ultra-fast and memory-efficient (meta-)genome assembler
http://www.ncbi.nlm.nih.gov/pubmed/25609793
GNU General Public License v3.0
588 stars 134 forks source link

too much time without any update files #317

Open JiaZhong28 opened 2 years ago

JiaZhong28 commented 2 years ago

image i was running megahit for contig assemblely with big data(179G for r1.fq) under the command:"megahit -1 r1.fastq -2 r2.fastq --min-count 2 --k-min 27 --k-max 87 --k-step 10 --num-cpu-threads 20 --min-contig-len 500 -o unmapped_megahit" .however, it has been 13 days past with nothing update information or files in my work_dir, the terminal shows that the program is still running without any error in log file.I am confused whether the program is running or the program is aborted due to memory problems.

Thx.