To me it looks like the minimum memory required is far below what I have available.. could you tell me where the problem is if it's not related to memory?
I realized that the issue was not with megahit, but with the snakemake to slurm command line that submitted the job to our cluster system. My apologies!
Hi @voutcn, I'm trying to run an assembly via a slurm cluster submission.
I requested 500 GB RAM and 24 cores.
The log files indicates
To me it looks like the minimum memory required is far below what I have available.. could you tell me where the problem is if it's not related to memory?
Thanks! Josephine