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voutcn / megahit

Ultra-fast and memory-efficient (meta-)genome assembler
http://www.ncbi.nlm.nih.gov/pubmed/25609793
GNU General Public License v3.0
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Illumina SE #365

Open nicolo-tellini opened 9 months ago

nicolo-tellini commented 9 months ago

Dear,

I am wondering if megahit can assemble metagenome sequenced with single-end Illumina reads only.

Thank

nic

terry105040819 commented 1 month ago

Hi @nicolo-tellini ,I also trying illumina Single-End reads for assembly here are my code megahit --r SE.fa -o megahit_result

cheers