vpc-ccg / pamir

Discovery and Genotyping of Novel Sequence Insertions in Many Sequenced Individuals
BSD 3-Clause "New" or "Revised" License
8 stars 4 forks source link

samtools and velvet threads #12

Closed calkan closed 4 years ago

calkan commented 5 years ago

Make these configurable. Also for gzip threads when applicable (see issue #11) @fhach @yenyilin

calkan commented 5 years ago

better yet, make a global --threads parameter that sets mrsfast, samtools, velvet threads together.

fhach commented 4 years ago

Fixed. @f0t1h, please reference this issue during merge of 2.0.0.