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vpc-ccg / sedef

Identification of segmental duplications in the genome
MIT License
26 stars 8 forks source link

update samtools command line #7

Closed calkan closed 5 years ago

calkan commented 5 years ago

update samtools command line to use the "-o" parameter in view. The current pamir implementation uses a very old version, that would not support CRAMs

calkan commented 5 years ago

oops, wrong repo