mrsfast mapping min/max

vpc-ccg / sedef

Identification of segmental duplications in the genome

MIT License

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mrsfast mapping min/max #8

Closed calkan closed 5 years ago

calkan commented 5 years ago

Most of the time the # of reads is not sufficient for mrsfast to determine min/max values. When the input is BAM/CRAM, just use the first ~100K lines in the input and calculate min/max. Then pass these values to mrsfast

calkan commented 5 years ago

oops, wrong repo