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vplagnol / ExomeDepth

ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.
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Error in `[<-.data.frame`(`*tmp*`, , column.name, value = c(NA_character_, : replacement has 2 rows, data has 0 #44

Open worker000000 opened 2 years ago

worker000000 commented 2 years ago

Thanks a lot for making such a powerful tool. when I use it with 20 normal samples, one MET 10 copy standard sample(4 different input hybird library) , but it continue throw the error

Error in [<-.data.frame(*tmp*, , column.name, value = c(NAcharacter, : replacement has 2 rows, data has 0

after I continuously remove the error column, it finally went through, and the error column starts from the MET 10 copy sample, and it just kept one MET 10 copy sample, and I can not know the copy number from the result

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aftrer remove 20th

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worker000000 commented 2 years ago

can anyone comment on this, thanks in advance, I use conda to install exomedepth