ED_R

[laraPPr]

• link to support ticket: #2024021660001175
• website: https://pecanproject.github.io/models/ed/docs/articles/running_ed_from_R.html#installing-the-r-package
• installation docs: https://pecanproject.github.io/models/ed/docs/articles/running_ed_from_R.html#installing-the-r-package
• toolchain: foss/2021b
• easyblock to use: RPackage?
• required dependencies:
  • [ ] R-bundle-Bioconductor/3.15-foss-2021b-R-4.2.0
• optional dependencies:
  • [ ] ...
• notes:
  • ...
• effort: (TBD)
• other install methods
  • conda: yes (link?) / no
  • container image: yes (link?) / no
  • pre-built binaries (RHEL8 Linux x86_64): yes (link?) / no
  • easyconfig outside EasyBuild: yes / no

[pavelToman]

is this still relevant? https://github.com/EDmodel/ED2/blob/master/ED/build/make/include.mk.ugent Another useful sites: https://github.com/EDmodel/ED2 https://github.com/EDmodel/ED2/wiki https://github.com/EDmodel/ED2/wiki/Using-Github-with-ED2 https://github.com/EDmodel/ED2/wiki/Quick-start https://github.com/EDmodel/ED2/wiki/Compiler-instructions-%28aka-the-include.mk-files%29

https://github.com/PecanProject/pecan https://pecanproject.github.io/pecan-documentation/v1.7.1/pecan-manual-setup.html

[laraPPr]

First install Pecan. See: https://github.com/vscentrum/vsc-software-stack/issues/309

[boegel]

Maybe useful for ED_R request: https://pecanproject.github.io/pecan-documentation/v1.7.1/workflow-modules.html#inst-ed2

[laraPPr]

It seems that ED_R is no more

I think this is now what they are using instead https://pecanproject.github.io/pecan-documentation/master/models-ed.html