Atropos

[laraPPr]

• link to support ticket: #2024042960001138
• website: https://github.com/jdidion/atropos
• installation docs: https://github.com/jdidion/atropos
• toolchain: 2023a
• easyblock to use: PythonPackage?
• required dependencies:
  • [x] Cython
• optional dependencies:
  • [x] pytest
  • [x] progressbar2 or tqdm
  • [x] pysam
  • [x] khmer
  • [x] jinja2
  • [x] ngstream
• notes:
  • https://github.com/easybuilders/easybuild-easyconfigs/blob/d5cf80e3c57ad6eedfebcb6da88d4e94b0856293/easybuild/easyconfigs/a/atropos/atropos-1.1.21-intel-2018b-Python-3.6.6.eb#L3
• effort: (TBD)
• other install methods
  • conda: yes (link?) / no
  • container image: yes (link?) / no
  • pre-built binaries (RHEL8 Linux x86_64): yes (link?) / no
  • easyconfig outside EasyBuild: yes / no

[pavelToman]

• https://github.com/easybuilders/easybuild-easyconfigs/pull/20557