MultiQC

[laraPPr]

• link to support ticket: #2024080960000553
• website: https://multiqc.info/
• installation docs: https://github.com/MultiQC/MultiQC?tab=readme-ov-file#installation
• toolchain: foss/2023a
• easyblock to use: PythonBundle
• required dependencies:
  • [ ] Python
  • [ ] Python-bundle-PyPI
  • [ ] Kaleido
  • [ ] matplotlib
  • [ ] plotly.py
  • [ ] pydantic
  • [ ] tqdm
  • [ ] Pillow
  • [ ] PyYAML
  • [ ] networkx
  • [ ]
• optional dependencies:
  • [ ] ...
• notes:
  • See: https://github.com/easybuilders/easybuild-easyconfigs/blob/develop/easybuild/easyconfigs/m/MultiQC/MultiQC-1.22.3-foss-2023b.eb
• effort: (TBD)
• other install methods
  • conda: yes (link?) / no
  • container image: yes (link?) / no
  • pre-built binaries (RHEL8 Linux x86_64): yes (link?) / no
  • easyconfig outside EasyBuild: yes / no

[laraPPr]

The user wants it to be compatible with GCC-12.3.0 but the dependencies on that toolchain are to old:

multiqc 1.23 has requirement plotly>=5.18, but you have plotly 5.16.0.

multiqc 1.23 has requirement pydantic>=2.7.1, but you have pydantic 2.5.3.

• pydantic-2.5.3-GCCcore-12.3.0.eb
• plotly.py-5.16.0-GCCcore-12.3.0.eb

[boegel]

@laraPPr Can you ask why they want it to be compatible with GCC/12.3.0?

That's probably because they want to combine it with other modules that are using that toolchain, we can look into updating those too

[laraPPr]

installing STAR and MultiQC on GCC-13.2.0 already have easyconfigs

[laraPPr]

installed and informed user