SecretomeP 2.0 - Githubissues

laraPPr commented 3 months ago

link to support ticket: #2024082160001118
website: https://services.healthtech.dtu.dk/services/SecretomeP-2.0/
installation docs: https://services.healthtech.dtu.dk/services/SecretomeP-2.0/
toolchain: GCC/12.3.0 or older
easyblock to use: ?
required dependencies:
- [ ] ProP
- [ ] PSORT II
- [ ] TMHMM
- [ ] SignalP
optional dependencies:
- [ ] ...
notes:
- ...
effort: (TBD)
other install methods
- conda: yes (link?) / no
- container image: yes (link?) / no
- pre-built binaries (RHEL8 Linux x86_64): yes (link?) / no
- easyconfig outside EasyBuild: yes / no

laraPPr commented 1 month ago

@pavelToman @PetrKralCZ This user is asking for an update so maybe one of you can look at this one next?

laraPPr commented 1 month ago

They also sent a tarball for psort

pavelToman commented 1 month ago

Could you or them also provide sources for this? Or where to get it?

boegel commented 2 weeks ago

@pavelToman The researcher wasn't able to find the sources for version 2.0 either, but we can look into installing the available 1.0h version

pavelToman commented 2 weeks ago

sources are there: /apps/gent/source/s/SecretomeP/secretomep-1.0h.Linux.tar.gz

vscentrum / vsc-software-stack