pyseer

[laraPPr]

• link to support ticket: #2024082760000948
• website: https://github.com/mgalardini/pyseer
• installation docs: https://github.com/mgalardini/pyseer
• toolchain: foss/2023a or older
• easyblock to use: PythonBundle
• required dependencies:
  • [ ] Python
  • [ ] SciPy-bundle
  • [ ] pybedtools
  • [ ] statsmodels
  • [ ] scikit-learn
  • [ ] Pysam
  • [ ] DendroPy
  • [ ] matplotlib
  • [ ] tqdm
• optional dependencies:
  • [ ] ...
• notes:
  • https://github.com/easybuilders/easybuild-easyconfigs/blob/develop/easybuild/easyconfigs/p/pyseer/pyseer-1.3.11-foss-2022b.eb
• effort: (TBD)
• other install methods
  • conda: yes (link?) / no
  • container image: yes (link?) / no
  • pre-built binaries (RHEL8 Linux x86_64): yes (link?) / no
  • easyconfig outside EasyBuild: yes / no

[PetrKralCZ]

• https://github.com/easybuilders/easybuild-easyconfigs/pull/21306

[boegel]

PR merged, ready for cleanup