Closed Sa753 closed 2 years ago
Any suggestions please?
Sorry for the long wait. I think that this is not a problem of leidenalg
, but rather of infercnv
. As you show, you have installed both leidenalg
and python-igraph
correctly, so there's little that can be done on this side.
If my understanding is correct, infercnv
is an R package that relies on the Python package of leidenalg
. I am not sure how it does this, but presumably they can help you better with this question than I can, feel free to open an issue in their repository: https://github.com/broadinstitute/infercnv
I'm closing this issue now. If there's anything still that does not work correctly from the leidenalg
perspective, feel free to report back and re-open if necessary.
Dear team
I am using
leidenalg
as part ofinfercnv
package and I am consistently getting an error thatI definitely have it installed and I can import it.
I am running python 3.7 and used
pip install leidenalg
to install itigraph
andpython-igraph
are also installed as shown belowI also have
igraph
andleiden
on RCould you please help? Thanks