Update codeql runner from v1 to v2

[optik-aper]

Description

The CodeQL runner v1 was deprecated and will not run. This updates all codeql-actions to v2

Checklist:

• [x] Have you checked to ensure there aren't other open Pull Requests for the same update/change?
• [x] Have you linted your code locally prior to submission?
• [x] Have you successfully ran tests with your changes locally?