vuthuyduong
commented
2 days ago Dear Vladimir,
I could not upload the unite2024ITS.classification file directly to my GitHub as it is too big. However, I have uploaded all the reference files in dnabarcoder's format to Zenodo (https://zenodo.org/record/12580255), so you can also download and use them.
If you wish to compute these files yourself, there are instructions in the section "How to obtain these UNITE ITS, ITS1, and ITS2 reference sequences?"
I hope this answers your question.
Best regards, Duong
On Fri, 28 Jun 2024 at 11:49, Vladimir Mikryukov @.***> wrote:
Hello!
I'm trying to follow the example to classify sequences using the pre-computed thresholds with the command:
dnabarcoder/dnabarcoder.py classify -i dnabarcoder/query.unite2024ITS_BLAST.bestmatch -c unite2024ITS.classification -cutoffs unite2024ITS.unique.cutoffs.best.json
However, there is no unite2024ITS.classification file in the repository. Could you please upload it?
With kind regards, Vladimir
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vmikk
Hello!
I'm trying to follow the example to classify sequences using the pre-computed thresholds with the command:
However, there is no
unite2024ITS.classificationfile in the repository.Could you please upload it?
With kind regards, Vladimir